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RpL17 ribosomal protein L17 [ Oppia nitens ]

Gene ID: 128966218, updated on 6-Jul-2024

Summary

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Gene symbol
RpL17
Gene description
ribosomal protein L17
See related
EnsemblRapid:LOC128966218
Gene type
protein coding
RefSeq status
MODEL
Organism
Oppia nitens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Sarcoptiformes; Oribatida; Brachypylina; Oppioidea; Oppiidae; Oppia
Orthologs
fruit fly all
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Genomic context

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See RpL17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_03 current nextdenovo-longstitch-racon4-pilon3 (GCF_028296485.1) Unplaced Scaffold NW_026533198.1 (126304..127147)

NW_026533198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128966063 Neighboring gene serine/threonine-protein kinase 32B-like Neighboring gene protein tyrosine phosphatase domain-containing protein 1-like Neighboring gene Poly(U)-binding-splicing factor hfp

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026533198 Unplaced Scaffold Reference nextdenovo-longstitch-racon4-pilon3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L17-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028296485.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference nextdenovo-longstitch-racon4-pilon3

Genomic

  1. NW_026533198.1 Reference nextdenovo-longstitch-racon4-pilon3

    Range
    126304..127147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054313059.1 → XP_054169034.1  60S ribosomal protein L17-like

    Related
    XP_054169034.1, XM_054313059.1
Nucleotide Protein
Heading Accession and Version

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