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gt transcription factor giant [ Episyrphus balteatus (marmalade hoverfly) ]

Gene ID: 129920103, updated on 9-Jul-2024

Summary

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Gene symbol
gt
Gene description
transcription factor giant
See related
EnsemblRapid:ENSEBLG00000000141
Gene type
protein coding
RefSeq status
MODEL
Organism
Episyrphus balteatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Syrphoidea; Syrphidae; Syrphinae; Syrphini; Episyrphus
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_05 current idEpiBalt1.1 (GCF_945859705.1) 4 NC_079137.1 (15678631..15680247)

Chromosome 4 - NC_079137.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S12, mitochondrial Neighboring gene uncharacterized LOC129917682 Neighboring gene homeotic protein female sterile-like Neighboring gene 28 kDa heat- and acid-stable phosphoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079137.1 Chromosome 4 Reference idEpiBalt1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Maternal activation of gap genes in the hover fly Episyrphus. Lemke S, et al. Development, 2010 May. PMID 20430746
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein giant
Names
putative giant protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_945859705.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idEpiBalt1.1

Genomic

  1. NC_079137.1 Reference idEpiBalt1.1

    Range
    15678631..15680247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056001301.1 → XP_055857276.1  protein giant

    Related
    ENSEBLP00000000084.1, ENSEBLT00000000177.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases