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LOC130160521 methylcytosine dioxygenase TET3-like [ Falco biarmicus (lanner falcon) ]

Gene ID: 130160521, updated on 18-Sep-2024

Summary

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Gene symbol
LOC130160521
Gene description
methylcytosine dioxygenase TET3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco biarmicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
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Genomic context

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See LOC130160521 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_05 current bFalBia1.pri (GCF_023638135.1) 18 NC_079305.1 (1237083..1251438)

Chromosome 18 - NC_079305.1Genomic Context describing neighboring genes Neighboring gene actin gamma 2, smooth muscle Neighboring gene deoxyguanosine kinase Neighboring gene methylcytosine dioxygenase TET3-like Neighboring gene bolA family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079305.1 Chromosome 18 Reference bFalBia1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5-methylcytosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: methylcytosine dioxygenase TET3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023638135.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalBia1.pri

Genomic

  1. NC_079305.1 Reference bFalBia1.pri

    Range
    1237083..1251438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056363093.1 → XP_056219068.1  LOW QUALITY PROTEIN: methylcytosine dioxygenase TET3-like

Nucleotide Protein
Heading Accession and Version