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tor3a torsin family 3, member A [ Centropristis striata (black sea bass) ]

Gene ID: 131978274, updated on 9-Jul-2024

Summary

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Gene symbol
tor3a
Gene description
torsin family 3, member A
See related
EnsemblRapid:ENSPUXG00000027915
Gene type
protein coding
RefSeq status
MODEL
Organism
Centropristis striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Serraninae; Centropristis
Orthologs
human zebrafish all
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Genomic context

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See tor3a in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current C.striata_1.0 (GCF_030273125.1) 9 NC_081525.1 (34169773..34176604)

Chromosome 9 - NC_081525.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131977815 Neighboring gene small nucleolar RNA snR60/Z15/Z230/Z193/J17 Neighboring gene small nucleolar RNA SNORD47 Neighboring gene calreticulin Neighboring gene epidermal growth factor receptor pathway substrate 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081525.1 Chromosome 9 Reference C.striata_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030273125.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.striata_1.0

Genomic

  1. NC_081525.1 Reference C.striata_1.0

    Range
    34169773..34176604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059341856.1 → XP_059197839.1  torsin-3A

    Related
    ENSPUXP00000055751.1, ENSPUXT00000065692.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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