U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC131993943 cationic amino acid transporter 2-like [ Centropristis striata (black sea bass) ]

Gene ID: 131993943, updated on 9-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC131993943
Gene description
cationic amino acid transporter 2-like
See related
EnsemblRapid:ENSPUXG00000002736
Gene type
protein coding
RefSeq status
MODEL
Organism
Centropristis striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Serraninae; Centropristis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC131993943 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_08 current C.striata_1.0 (GCF_030273125.1) 20 NC_081536.1 (30670682..30685623)

Chromosome 20 - NC_081536.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene mas-related G-protein coupled receptor member H-like Neighboring gene serine/threonine-protein kinase VRK1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081536.1 Chromosome 20 Reference C.striata_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cationic amino acid transporter 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030273125.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.striata_1.0

Genomic

  1. NC_081536.1 Reference C.striata_1.0

    Range
    30670682..30685623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059360021.1 → XP_059216004.1  cationic amino acid transporter 2-like

    Related
    ENSPUXP00000005430.1, ENSPUXT00000005905.1

RNA

  1. XR_009396367.1 RNA Sequence

  2. XR_009396366.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases