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LOC131993950 major histocompatibility complex class I-related gene protein-like [ Centropristis striata (black sea bass) ]

Gene ID: 131993950, updated on 20-Apr-2024

Summary

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Gene symbol
LOC131993950
Gene description
major histocompatibility complex class I-related gene protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Centropristis striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Serraninae; Centropristis
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Genomic context

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See LOC131993950 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current C.striata_1.0 (GCF_030273125.1) 20 NC_081536.1 (29887734..29894448, complement)

Chromosome 20 - NC_081536.1Genomic Context describing neighboring genes Neighboring gene carbonyl reductase 1 Neighboring gene SET domain containing 4 Neighboring gene NLR family CARD domain-containing protein 3-like Neighboring gene stonustoxin subunit beta-like Neighboring gene NLR family CARD domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081536.1 Chromosome 20 Reference C.striata_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major histocompatibility complex class I-related gene protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030273125.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.striata_1.0

Genomic

  1. NC_081536.1 Reference C.striata_1.0

    Range
    29887734..29894448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059360028.1 → XP_059216011.1  major histocompatibility complex class I-related gene protein-like

Nucleotide Protein
Heading Accession and Version

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