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PLEKHN1 pleckstrin homology domain containing N1 [ Bos taurus (domestic cattle) ]

Gene ID: 132342479, updated on 10-Oct-2024

Summary

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Official Symbol
PLEKHN1provided by VGNC
Official Full Name
pleckstrin homology domain containing N1provided by VGNC
Primary source
VGNC:VGNC:33025
See related
Ensembl:ENSBTAG00000013813
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PLEKHN1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (51498763..51506509, complement)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene ISG15 ubiquitin like modifier Neighboring gene hes family bHLH transcription factor 4 Neighboring gene PPARGC1 and ESRR induced regulator, muscle 1 Neighboring gene kelch like family member 17 Neighboring gene NOC2 like nucleolar associated transcriptional repressor Neighboring gene sterile alpha motif domain containing 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cardiolipin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-UTR-mediated mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family N member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    51498763..51506509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875785.1 → XP_059731768.1  pleckstrin homology domain-containing family N member 1 isoform X2

  2. XM_059875784.1 → XP_059731767.1  pleckstrin homology domain-containing family N member 1 isoform X1

    UniProtKB/TrEMBL
    E1BMJ2
    Related
    ENSBTAP00000019320.4, ENSBTAT00000019320.5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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