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LEMA_P016270.1 similar to 60S ribosomal protein L6 [ Leptosphaeria maculans JN3 ]

Gene ID: 13293180, updated on 17-May-2024

Summary

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Gene symbol
LEMA_P016270.1
Gene description
similar to 60S ribosomal protein L6
Primary source
FungiDB:LEMA_P016270.1
Locus tag
LEMA_P016270.1
See related
VEuPathDB:LEMA_P016270.1
Gene type
protein coding
RNA name
similar to 60S ribosomal protein L6
RefSeq status
PROVISIONAL
Organism
Leptosphaeria maculans JN3 (isolate: v23.1.3)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Leptosphaeriaceae; Leptosphaeria; Leptosphaeria maculans species complex
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Genomic context

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See LEMA_P016270.1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_003533877.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene similar to 3'(2'),5'-bisphosphate nucleotidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003533877.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Effector diversification within compartments of the Leptosphaeria maculans genome affected by Repeat-Induced Point mutations. Rouxel T, et al. Nat Commun, 2011 Feb 15. PMID 21326234, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
similar to 60S ribosomal protein L6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003533877.1 Reference assembly

    Range
    1240043..1240851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003843928.1 → XP_003843976.1  similar to 60S ribosomal protein L6 [Leptosphaeria maculans JN3]

    See identical proteins and their annotated locations for XP_003843976.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E5AA06
    Conserved Domains (2) summary
    TIGR03654
    Location:49 → 247
    L6_bact; ribosomal protein L6, bacterial type
    pfam00347
    Location:153 → 237
    Ribosomal_L6; Ribosomal protein L6
Nucleotide Protein
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