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HSPBAP1P1 HSPBAP1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 133039962, updated on 28-Oct-2024

Summary

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Official Symbol
HSPBAP1P1provided by HGNC
Official Full Name
HSPBAP1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:56946
See related
Ensembl:ENSG00000277315 AllianceGenome:HGNC:56946
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See HSPBAP1P1 in Genome Data Viewer
Location:
20p12.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (7867329..7867616)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (7909120..7909407)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (7847976..7848263)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372518 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:7756914-7757097 Neighboring gene serine and arginine rich splicing factor 10 pseudogene 2 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7831618-7832119 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7832120-7832620 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr20:7837050-7838249 Neighboring gene hydroxyacid oxidase 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17535 Neighboring gene NANOG hESC enhancer GRCh37_chr20:7936767-7937438 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:7964803-7965420 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12666 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12667 Neighboring gene thioredoxin related transmembrane protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_242245.1 

    Range
    101..388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    7867329..7867616
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    7909120..7909407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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