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nAChRbeta1 nicotinic acetylcholine receptor beta1 [ Cydia pomonella (codling moth) ]

Gene ID: 133519030, updated on 22-May-2024

Summary

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Gene symbol
nAChRbeta1
Gene description
nicotinic acetylcholine receptor beta1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia pomonella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See nAChRbeta1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current ilCydPomo1 (GCF_033807575.1) 6 NC_084708.1 (13563308..13575937, complement)

Chromosome 6 - NC_084708.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ari-2 Neighboring gene RNA polymerase II subunit RpII215 Neighboring gene nicotinic Acetylcholine Receptor alpha7 Neighboring gene uncharacterized LOC133519031

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084708.1 Chromosome 6 Reference ilCydPomo1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative nicotinic acetylcholine receptor subunits express differentially through the life cycle of codling moth, Cydia pomonella (Lepidoptera: Tortricidae). Martin JA, et al. Insect Sci, 2016 Apr. PMID 25504620
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit beta-like 1
Names
nicotinic acetylcholine receptor subunit beta 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807575.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydPomo1

Genomic

  1. NC_084708.1 Reference ilCydPomo1

    Range
    13563308..13575937 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061852891.1 → XP_061708875.1  acetylcholine receptor subunit beta-like 1 isoform X1

  2. XM_061852892.1 → XP_061708876.1  acetylcholine receptor subunit beta-like 1 isoform X2

Nucleotide Protein
Heading Accession and Version