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Ir25a ionotropic receptor 25a [ Cydia pomonella (codling moth) ]

Gene ID: 133522678, updated on 24-May-2024

Summary

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Gene symbol
Ir25a
Gene description
ionotropic receptor 25a
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia pomonella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See Ir25a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_12 current ilCydPomo1 (GCF_033807575.1) 11 NC_084713.1 (5178165..5201041, complement)

Chromosome 11 - NC_084713.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133522675 Neighboring gene leucine zipper putative tumor suppressor 2 homolog Neighboring gene nucleolin-like Neighboring gene Protein kinase, cAMP-dependent, catalytic subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084713.1 Chromosome 11 Reference ilCydPomo1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative chemosensory receptors of the codling moth, Cydia pomonella, identified by antennal transcriptome analysis. Bengtsson JM, et al. PLoS One, 2012. PMID 22363688, Free PMC Article
  2. The chemosensory receptors of codling moth Cydia pomonella-expression in larvae and adults. Walker WB 3rd, et al. Sci Rep, 2016 Mar 23. PMID 27006164, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate-gated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ionotropic receptor 25a
Names
putative ionotropic receptor IR25a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807575.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydPomo1

Genomic

  1. NC_084713.1 Reference ilCydPomo1

    Range
    5178165..5201041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061858080.1 → XP_061714064.1  ionotropic receptor 25a

Nucleotide Protein
Heading Accession and Version