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Orco odorant receptor co-receptor [ Cydia pomonella (codling moth) ]

Gene ID: 133528736, updated on 22-May-2024

Summary

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Gene symbol
Orco
Gene description
odorant receptor co-receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia pomonella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See Orco in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_12 current ilCydPomo1 (GCF_033807575.1) 20 NC_084722.1 (6784251..6804537)

Chromosome 20 - NC_084722.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133529313 Neighboring gene uncharacterized LOC133529314 Neighboring gene transfer RNA glutamine (anticodon CUG) Neighboring gene ras-like protein family member 10B Neighboring gene trypsin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084722.1 Chromosome 20 Reference ilCydPomo1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative chemosensory receptors of the codling moth, Cydia pomonella, identified by antennal transcriptome analysis. Bengtsson JM, et al. PLoS One, 2012. PMID 22363688, Free PMC Article
  2. The chemosensory receptors of codling moth Cydia pomonella-expression in larvae and adults. Walker WB 3rd, et al. Sci Rep, 2016 Mar 23. PMID 27006164, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
odorant receptor coreceptor
Names
putative odorant receptor co-receptor ORco

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807575.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydPomo1

Genomic

  1. NC_084722.1 Reference ilCydPomo1

    Range
    6784251..6804537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061866189.1 → XP_061722173.1  odorant receptor coreceptor

Nucleotide Protein
Heading Accession and Version