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Nmdar1 NMDA receptor 1 [ Cydia pomonella (codling moth) ]

Gene ID: 133533040, updated on 23-May-2024

Summary

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Gene symbol
Nmdar1
Gene description
NMDA receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia pomonella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See Nmdar1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_12 current ilCydPomo1 (GCF_033807575.1) 2 NC_084704.1 (8366591..8374025)

Chromosome 2 - NC_084704.1Genomic Context describing neighboring genes Neighboring gene mitochondrial glutamate carrier 1-like Neighboring gene tol-Pal system protein TolA-like Neighboring gene uncharacterized LOC133533092 Neighboring gene V-type proton ATPase subunit Vha26 Neighboring gene CCR4-NOT transcription complex subunit regena

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084704.1 Chromosome 2 Reference ilCydPomo1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative chemosensory receptors of the codling moth, Cydia pomonella, identified by antennal transcriptome analysis. Bengtsson JM, et al. PLoS One, 2012. PMID 22363688, Free PMC Article
  2. The chemosensory receptors of codling moth Cydia pomonella-expression in larvae and adults. Walker WB 3rd, et al. Sci Rep, 2016 Mar 23. PMID 27006164, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NMDA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ionotropic glutamate receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NMDA selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate [NMDA] receptor subunit 1
Names
putative ionotropic glutamate receptor iGluR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807575.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydPomo1

Genomic

  1. NC_084704.1 Reference ilCydPomo1

    Range
    8366591..8374025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061871961.1 → XP_061727945.1  glutamate [NMDA] receptor subunit 1 isoform X1

  2. XM_061871970.1 → XP_061727954.1  glutamate [NMDA] receptor subunit 1 isoform X2

Nucleotide Protein
Heading Accession and Version