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Tpi triose phosphate isomerase [ Cydia pomonella (codling moth) ]

Gene ID: 133534731, updated on 22-May-2024

Summary

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Gene symbol
Tpi
Gene description
triose phosphate isomerase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia pomonella
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See Tpi in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_12 current ilCydPomo1 (GCF_033807575.1) 1 NC_084703.1 (11417916..11425038)

Chromosome 1 - NC_084703.1Genomic Context describing neighboring genes Neighboring gene protein disulfide-isomerase A5 Neighboring gene uncharacterized LOC133534744 Neighboring gene putative fatty acyl-CoA reductase CG5065 Neighboring gene uncharacterized LOC133534737 Neighboring gene uncharacterized LOC133534674

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084703.1 Chromosome 1 Reference ilCydPomo1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neo-sex chromosomes and adaptive potential in tortricid pests. Nguyen P, et al. Proc Natl Acad Sci U S A, 2013 Apr 23. PMID 23569222, Free PMC Article
  2. Resolving arthropod phylogeny: exploring phylogenetic signal within 41 kb of protein-coding nuclear gene sequence. Regier JC, et al. Syst Biol, 2008 Dec. PMID 19085333
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triosephosphate isomerase
Names
putative triosephosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033807575.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydPomo1

Genomic

  1. NC_084703.1 Reference ilCydPomo1

    Range
    11417916..11425038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061873979.1 → XP_061729963.1  triosephosphate isomerase

Nucleotide Protein
Heading Accession and Version