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LOC133624645 ETS-related transcription factor Elf-2-like [ Nerophis lumbriciformis (worm pipefish) ]

Gene ID: 133624645, updated on 18-Sep-2024

Summary

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Gene symbol
LOC133624645
Gene description
ETS-related transcription factor Elf-2-like
See related
EnsemblRapid:ENSIQYG00000043096
Gene type
protein coding
RefSeq status
MODEL
Organism
Nerophis lumbriciformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Nerophis
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Genomic context

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See LOC133624645 in Genome Data Viewer
Location:
chromosome: LG27
Exon count:
12
Annotation release Status Assembly LG Location
RS_2023_12 current RoL_Nlum_1.0 (GCF_033978685.1) LG27 NC_084574.1 (17926672..17994523, complement)

Linkage Group LG27 - NC_084574.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase delta subunit 4-like Neighboring gene nocturnin-like Neighboring gene protein MGARP-like Neighboring gene anaphase-promoting complex subunit 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084574.1 Chromosome LG27 Reference RoL_Nlum_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by GO

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS-related transcription factor Elf-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033978685.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Nlum_1.0

Genomic

  1. NC_084574.1 Reference RoL_Nlum_1.0

    Range
    17926672..17994523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061988392.1 → XP_061844376.1  ETS-related transcription factor Elf-2-like isoform X1

    Related
    ENSIQYP00000058117.1, ENSIQYT00000072490.1

  2. XM_061988394.1 → XP_061844378.1  ETS-related transcription factor Elf-2-like isoform X2

    Related
    ENSIQYP00000058116.1, ENSIQYT00000072489.1

  3. XM_061988393.1 → XP_061844377.1  ETS-related transcription factor Elf-2-like isoform X1

  4. XM_061988395.1 → XP_061844379.1  ETS-related transcription factor Elf-2-like isoform X3

    Related
    ENSIQYP00000058115.1, ENSIQYT00000072488.1
Nucleotide Protein Strain
Heading Accession and Version