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PTPN6 protein tyrosine phosphatase non-receptor type 6 [ Cinclus cinclus ]

Gene ID: 134056720, updated on 3-Aug-2024

Summary

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Gene symbol
PTPN6
Gene description
protein tyrosine phosphatase non-receptor type 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Cinclus cinclus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cinclidae; Cinclus
Orthologs
human mouse all
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Genomic context

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See PTPN6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_01 current bCinCin1.1 (GCF_963662255.1) 2 NC_085047.1 (30283163..30297809)

Chromosome 2 - NC_085047.1Genomic Context describing neighboring genes Neighboring gene atrophin 1 Neighboring gene U7 small nuclear RNA Neighboring gene chromosome 2 C12orf57 homolog Neighboring gene prohibitin 2 Neighboring gene EMG1 N1-specific pseudouridine methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085047.1 Chromosome 2 Reference bCinCin1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963662255.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCinCin1.1

Genomic

  1. NC_085047.1 Reference bCinCin1.1

    Range
    30283163..30297809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062513593.1 → XP_062369577.1  tyrosine-protein phosphatase non-receptor type 6

Nucleotide Protein
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