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C1S complement C1s [ Cinclus cinclus ]

Gene ID: 134056736, updated on 3-Aug-2024

Summary

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Gene symbol
C1S
Gene description
complement C1s
Gene type
protein coding
RefSeq status
MODEL
Organism
Cinclus cinclus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cinclidae; Cinclus
Orthologs
human mouse all
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Genomic context

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See C1S in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_01 current bCinCin1.1 (GCF_963662255.1) 2 NC_085047.1 (30333268..30341103)

Chromosome 2 - NC_085047.1Genomic Context describing neighboring genes Neighboring gene EMG1 N1-specific pseudouridine methyltransferase Neighboring gene lysophosphatidylcholine acyltransferase 3 Neighboring gene complement C1r Neighboring gene retinol binding protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085047.1 Chromosome 2 Reference bCinCin1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in complement activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complement C1s subcomponent

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963662255.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCinCin1.1

Genomic

  1. NC_085047.1 Reference bCinCin1.1

    Range
    30333268..30341103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062513617.1 → XP_062369601.1  complement C1s subcomponent

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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