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SPICE1 spindle and centriole associated protein 1 [ Cinclus cinclus ]

Gene ID: 134058276, updated on 3-Aug-2024

Summary

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Gene symbol
SPICE1
Gene description
spindle and centriole associated protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cinclus cinclus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Cinclidae; Cinclus
Orthologs
human mouse all
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Genomic context

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See SPICE1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_01 current bCinCin1.1 (GCF_963662255.1) 2 NC_085047.1 (28635207..28658770, complement)

Chromosome 2 - NC_085047.1Genomic Context describing neighboring genes Neighboring gene V-set domain containing T cell activation inhibitor 1 Neighboring gene tripartite motif containing 45 Neighboring gene SID1 transmembrane family member 1 Neighboring gene upstream transcription factor family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085047.1 Chromosome 2 Reference bCinCin1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in metaphase chromosome alignment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spindle and centriole-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963662255.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCinCin1.1

Genomic

  1. NC_085047.1 Reference bCinCin1.1

    Range
    28635207..28658770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062515515.1 → XP_062371499.1  spindle and centriole-associated protein 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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