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CLSTN3 calsyntenin 3 [ Cinclus cinclus ]

Gene ID: 134058293, updated on 29-Mar-2024

Summary

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Gene symbol
CLSTN3
Gene description
calsyntenin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cinclus cinclus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Cinclidae; Cinclus
Orthologs
human mouse all
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Genomic context

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See CLSTN3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_01 current bCinCin1.1 (GCF_963662255.1) 2 NC_085047.1 (30357453..30372402)

Chromosome 2 - NC_085047.1Genomic Context describing neighboring genes Neighboring gene complement C1r Neighboring gene retinol binding protein 5 Neighboring gene solute carrier family 25 member 33-like Neighboring gene peroxisomal biogenesis factor 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085047.1 Chromosome 2 Reference bCinCin1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables X11-like protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinesin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calsyntenin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963662255.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCinCin1.1

Genomic

  1. NC_085047.1 Reference bCinCin1.1

    Range
    30357453..30372402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062515551.1 → XP_062371535.1  calsyntenin-3

Nucleotide Protein
Heading Accession and Version

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