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LOC135325170 calpastatin-like [ Dromaius novaehollandiae (emu) ]

Gene ID: 135325170, updated on 19-Apr-2024

Summary

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Gene symbol
LOC135325170
Gene description
calpastatin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
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Genomic context

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See LOC135325170 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) Z NC_088132.1 (48560217..48622295, complement)

Chromosome Z - NC_088132.1Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum aminopeptidase 2-like Neighboring gene endoplasmic reticulum aminopeptidase 1-like Neighboring gene uncharacterized LOC135324938 Neighboring gene neuroendocrine convertase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088132.1 Chromosome Z Reference bDroNov1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inhibition of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calpastatin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088132.1 Reference bDroNov1.hap1

    Range
    48560217..48622295 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064502910.1 → XP_064358980.1  calpastatin-like isoform X2

  2. XM_064502913.1 → XP_064358983.1  calpastatin-like isoform X5

  3. XM_064502909.1 → XP_064358979.1  calpastatin-like isoform X1

  4. XM_064502911.1 → XP_064358981.1  calpastatin-like isoform X3

  5. XM_064502912.1 → XP_064358982.1  calpastatin-like isoform X4

  6. XM_064502915.1 → XP_064358985.1  calpastatin-like isoform X7

  7. XM_064502914.1 → XP_064358984.1  calpastatin-like isoform X6

Nucleotide Protein
Heading Accession and Version