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LOC135696814 tRNA (cytosine(38)-C(5))-methyltransferase-like [ Rhopilema esculentum ]

Gene ID: 135696814, updated on 20-May-2024

Summary

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Gene symbol
LOC135696814
Gene description
tRNA (cytosine(38)-C(5))-methyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhopilema esculentum
Lineage
Eukaryota; Metazoa; Cnidaria; Scyphozoa; Rhizostomeae; Rhizostomatidae; Rhopilema
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Genomic context

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See LOC135696814 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_04 current ASM1307630v1 (GCF_013076305.1) Unplaced Scaffold NW_027019301.1 (7473628..7484553, complement)

NW_027019301.1Genomic Context describing neighboring genes Neighboring gene very-long-chain 3-oxoacyl-CoA reductase-like Neighboring gene muscle-specific protein 20-like Neighboring gene 14-3-3-like protein 2 Neighboring gene forkhead box protein N2-like Neighboring gene uncharacterized LOC135696815 Neighboring gene uncharacterized LOC135680993 Neighboring gene prolyl 3-hydroxylase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_027019301 Unplaced Scaffold Reference ASM1307630v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (cytosine(38)-C(5))-methyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013076305.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1307630v1 Primary Assembly

Genomic

  1. NW_027019301.1 Reference ASM1307630v1 Primary Assembly

    Range
    7473628..7484553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065216336.1 → XP_065072408.1  tRNA (cytosine(38)-C(5))-methyltransferase-like

Nucleotide Protein
Heading Accession and Version

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