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F485_gp326 baseplate hub subunit and tail lysozyme [ Aeromonas phage CC2 ]

Gene ID: 14016554, updated on 8-Jan-2023

Summary

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Gene symbol
F485_gp326
Gene description
baseplate hub subunit and tail lysozyme
Locus tag
F485_gp326
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aeromonas phage CC2 (nat-host: Aeromonas hydrophila)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Emmerichvirinae; Ceceduovirus; Ceceduovirus cc2
Old locus tag
CC2_338
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Genomic context

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Sequence:
NC_019538.1 (182643..184481, complement)

NC_019538.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tail protein Neighboring gene baseplate wedge subunit Neighboring gene baseplate tail tube cap Neighboring gene head closure Neighboring gene DNA end protector

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_019538.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of Aeromonas hydrophila Phage CC2. Shen CJ, et al. J Virol, 2012 Oct. PMID 22966192, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
baseplate hub subunit and tail lysozyme
YP_007010364.1
  • gp5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019538.1 Reference assembly

    Range
    182643..184481 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_007010364.1 baseplate hub subunit and tail lysozyme [Aeromonas phage CC2]

    See identical proteins and their annotated locations for YP_007010364.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I6X7Y8
    Conserved Domains (4) summary
    pfam06714
    Location:28 → 180
    Gp5_OB; Gp5 N-terminal OB domain
    PHA02596
    Location:5 → 612
    5; baseplate hub subunit and tail lysozyme; Provisional
    cd00735
    Location:182 → 345
    bacteriophage_T4-like_lysozyme; Bacteriophage T4-like lysozymes hydrolyse the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc) in peptidoglycan heteropolymers of prokaryotic cell walls. Members include a variety of bacteriophages (T4, ...
    cl23771
    Location:499 → 594
    Big_3_4; Bacterial Ig-like domain (group 3)
Nucleotide Protein
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