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Fgf14 fibroblast growth factor 14 [ Mus musculus (house mouse) ]

Gene ID: 14169, updated on 5-Nov-2024

Summary

Official Symbol
Fgf14provided by MGI
Official Full Name
fibroblast growth factor 14provided by MGI
Primary source
MGI:MGI:109189
See related
Ensembl:ENSMUSG00000025551 AllianceGenome:MGI:109189
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fhf4; FHF-4; Fgf1b; FGF-14; mFHF-4(1B); Tg(tetO-MAPT*P301L)4510Kha
Summary
Predicted to enable growth factor activity; heparin binding activity; and sodium channel regulator activity. Acts upstream of or within several processes, including adult locomotory behavior; neuromuscular process; and positive regulation of sodium ion transport. Located in cytosol and nucleus. Is expressed in several structures, including alimentary system; brain; cardiovascular system; respiratory system; and sensory organ. Used to study Alzheimer's disease; frontotemporal dementia; and spinocerebellar ataxia type 27. Human ortholog(s) of this gene implicated in autosomal dominant cerebellar ataxia. Orthologous to human FGF14 (fibroblast growth factor 14). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in cerebellum adult (RPKM 4.3), cortex adult (RPKM 2.4) and 7 other tissues See more
Orthologs
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Genomic context

See Fgf14 in Genome Data Viewer
Location:
14 E5; 14 66.18 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (124211257..124915098, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (123974441..124677686, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_37795 Neighboring gene STARR-seq mESC enhancer starr_37796 Neighboring gene integrin, beta-like 1 Neighboring gene basic transcription factor 3, pseudogene 4 Neighboring gene STARR-seq mESC enhancer starr_37797 Neighboring gene RIKEN cDNA 1700024B18 gene Neighboring gene predicted gene, 25272 Neighboring gene STARR-seq mESC enhancer starr_37799 Neighboring gene STARR-seq mESC enhancer starr_37800 Neighboring gene predicted gene 15422 Neighboring gene STARR-seq mESC enhancer starr_37801 Neighboring gene predicted gene, 53849 Neighboring gene STARR-seq mESC enhancer starr_37802 Neighboring gene STARR-seq mESC enhancer starr_37804 Neighboring gene STARR-seq mESC enhancer starr_37805 Neighboring gene olfactory receptor family 6 subfamily C member 220, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_37806 Neighboring gene STARR-seq mESC enhancer starr_37807

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC129318, MGC129319

Gene Ontology Provided by MGI

Function Evidence Code Pubs
NOT enables fibroblast growth factor receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
enables growth factor activity ISO
Inferred from Sequence Orthology
more info
 
enables heparin binding ISO
Inferred from Sequence Orthology
more info
 
enables sodium channel regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
fibroblast growth factor 14
Names
fibroblast growth factor 1b
fibroblast growth factor homologous factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010201.5NP_034331.2  fibroblast growth factor 14 isoform a

    See identical proteins and their annotated locations for NP_034331.2

    Status: VALIDATED

    Source sequence(s)
    AC154195, AC161001
    Consensus CDS
    CCDS27356.1
    UniProtKB/Swiss-Prot
    P70379, Q3KNZ6, Q8BST0, Q9JHL9
    UniProtKB/TrEMBL
    A0A0R4J063
    Related
    ENSMUSP00000026631.6, ENSMUST00000026631.6
    Conserved Domains (1) summary
    pfam00167
    Location:72197
    FGF; Fibroblast growth factor
  2. NM_207667.4NP_997550.1  fibroblast growth factor 14 isoform b

    See identical proteins and their annotated locations for NP_997550.1

    Status: VALIDATED

    Source sequence(s)
    AC154195, AC161001, AC164978
    Consensus CDS
    CCDS27355.1
    UniProtKB/TrEMBL
    O89096
    Related
    ENSMUSP00000093185.4, ENSMUST00000095529.10
    Conserved Domains (1) summary
    pfam00167
    Location:77202
    FGF; Fibroblast growth factor

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    124211257..124915098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017315845.2XP_017171334.1  fibroblast growth factor 14 isoform X1

    Conserved Domains (1) summary
    smart00442
    Location:22152
    FGF; Acidic and basic fibroblast growth factor family
  2. XM_011244952.4XP_011243254.1  fibroblast growth factor 14 isoform X2

    See identical proteins and their annotated locations for XP_011243254.1

    UniProtKB/Swiss-Prot
    P70379
    Conserved Domains (1) summary
    pfam00167
    Location:1113
    FGF; Fibroblast growth factor
  3. XM_006518549.5XP_006518612.1  fibroblast growth factor 14 isoform X3

    Conserved Domains (1) summary
    cl00060
    Location:74141
    FGF; Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate ...