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C11orf40 chromosome 11 putative open reading frame 40 [ Homo sapiens (human) ]

Gene ID: 143501, updated on 5-Mar-2024

Summary

Official Symbol
C11orf40provided by HGNC
Official Full Name
chromosome 11 putative open reading frame 40provided by HGNC
Primary source
HGNC:HGNC:23986
See related
Ensembl:ENSG00000171987 AllianceGenome:HGNC:23986
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NOV1
Orthologs
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Genomic context

See C11orf40 in Genome Data Viewer
Location:
11p15.4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (4571423..4577820, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (4636704..4643108, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (4592653..4599050, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 52 subfamily M member 2 pseudogene Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:4544619-4545119 Neighboring gene olfactory receptor family 52 subfamily M member 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:4590598-4590803 Neighboring gene olfactory receptor family 52 subfamily I member 2 Neighboring gene olfactory receptor family 52 subfamily I member 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_172945.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC090719
    Related
    ENST00000668205.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    4571423..4577820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    4636704..4643108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_144663.1: Suppressed sequence

    Description
    NM_144663.1: This RefSeq was removed because it is now thought that this gene does encode a protein.