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Gja3 gap junction protein, alpha 3 [ Mus musculus (house mouse) ]

Gene ID: 14611, updated on 2-Nov-2024

Summary

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Official Symbol
Gja3provided by MGI
Official Full Name
gap junction protein, alpha 3provided by MGI
Primary source
MGI:MGI:95714
See related
Ensembl:ENSMUSG00000048582 AllianceGenome:MGI:95714
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cx43; Cx46; Cnx46; Cxnj1; Gja-3
Summary
Predicted to enable gap junction hemi-channel activity and identical protein binding activity. Predicted to be involved in several processes, including gap junction-mediated intercellular transport; response to hydrogen peroxide; and response to pH. Located in gap junction and plasma membrane. Is expressed in chondrocranium; lens; metanephros; and testis. Used to study cataract 14 multiple types. Human ortholog(s) of this gene implicated in cataract 14 multiple types. Orthologous to human GJA3 (gap junction protein alpha 3). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in heart adult (RPKM 6.5) and limb E14.5 (RPKM 0.9) See more
Orthologs
human all
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Genomic context

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See Gja3 in Genome Data Viewer
Location:
14 C3; 14 29.82 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (57271917..57295487, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (57034460..57058030, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36789 Neighboring gene RIKEN cDNA B020004C17 gene Neighboring gene gap junction protein, beta 2 Neighboring gene predicted gene, 32912 Neighboring gene predicted gene 4491

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Transient decrease in gap junction expression during compensatory renal growth in mice. Li S, et al. Urology, 2002 Oct. PMID 12385951
  2. Connexin 46 (cx46) gap junctions provide a pathway for the delivery of glutathione to the lens nucleus. Slavi N, et al. J Biol Chem, 2014 Nov 21. PMID 25294879, Free PMC Article
  3. Quantitative X-ray tomographic analysis reveals calcium precipitation in cataractogenesis. Li Y, et al. Sci Rep, 2021 Aug 31. PMID 34465795, Free PMC Article
  4. Global gene expression analysis of lenses from different mouse strains and in the alpha3Cx46 knockout mouse. Tang Y, et al. Mol Vis, 2010 Jan 27. PMID 20104256, Free PMC Article
  5. Physiological and Optical Alterations Precede the Appearance of Cataracts in Cx46fs380 Mice. Minogue PJ, et al. Invest Ophthalmol Vis Sci, 2017 Aug 1. PMID 28810266, Free PMC Article

See all (74) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Connexins 30 and 43 expression changes in relation to age-related hearing loss.
    Title: Connexins 30 and 43 expression changes in relation to age-related hearing loss.
  2. Levels and Modifications of Both Lens Fiber Cell Connexins Are Affected in Connexin Mutant Mice.
    Title: Levels and Modifications of Both Lens Fiber Cell Connexins Are Affected in Connexin Mutant Mice.
  3. Do Connexin Mutants Cause Cataracts by Perturbing Glutathione Levels and Redox Metabolism in the Lens?
    Title: Do Connexin Mutants Cause Cataracts by Perturbing Glutathione Levels and Redox Metabolism in the Lens?
  4. that expression and phosphorylation of connexin 46 and connexin 45 are complementary in seminiferous tubules
    Title: Complementary expression and phosphorylation of Cx46 and Cx50 during development and following gene deletion in mouse and in normal and orchitic mink testes.
  5. The localization and sizes of Cx50 gap junction plaques in DKO fibers were unaffected, suggesting that Cx46 and Cx50 form homomeric channels
    Title: Lens ion homeostasis relies on the assembly and/or stability of large connexin 46 gap junction plaques on the broad sides of differentiating fiber cells.
  6. Data indicate that connexin 46 (cx46) is essential for the maintenance of adequate levels of glutathione (GSH) in the lens nucleus.
    Title: Connexin 46 (cx46) gap junctions provide a pathway for the delivery of glutathione to the lens nucleus.
  7. Cx46 was severely reduced in both heterozygous and homozygous Cx46fs380 lenses at 1 month of age, whereas immunoreactive connexin50 (Cx50) was moderately decreased.
    Title: Connexin46fs380 causes progressive cataracts.
  8. Results suggest that Cx46 hemichannels may contribute to the sodium leak conductance in lens fiber cells.
    Title: Cx46 hemichannels contribute to the sodium leak conductance in lens fiber cells.
  9. Data show that Ca(V) 1.2 and 1.3 channels are expressed in lens, regulating phosphorylation of aquaporin-0 and myosin light chain and expression of connexins 50 and 46.
    Title: L-type calcium channels play a critical role in maintaining lens transparency by regulating phosphorylation of aquaporin-0 and myosin light chain and expression of connexins.
  10. These results provide further evidence that Cx43 and Cx46 form both heterotypic and heteromeric channels when co-expressed.
    Title: Functional analysis of hemichannels and gap-junctional channels formed by connexins 43 and 46.
Submit: New GeneRIF Correction See all GeneRIFs (14)

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (2)  1 citation

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables gap junction channel activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables gap junction channel activity ISO
Inferred from Sequence Orthology
more info
  
enables gap junction hemi-channel activity ISO
Inferred from Sequence Orthology
more info
  
enables gap junction hemi-channel activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
  
involved_in cell-cell signaling IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gap junction-mediated intercellular transport ISO
Inferred from Sequence Orthology
more info
  
involved_in gap junction-mediated intercellular transport ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in response to hydrogen peroxide ISO
Inferred from Sequence Orthology
more info
  
involved_in response to pH ISO
Inferred from Sequence Orthology
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of connexin complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of connexin complex ISO
Inferred from Sequence Orthology
more info
  
part_of connexin complex ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in gap junction IDA
Inferred from Direct Assay
more info
 PubMed 
located_in gap junction ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
  
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
gap junction alpha-3 protein
Names
alpha 3 connexin
connexin j1
connexin-46
gap junction membrane channel protein alpha 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271623.1 → NP_001258552.1  gap junction alpha-3 protein

    See identical proteins and their annotated locations for NP_001258552.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC119952, AK136383, BC138492, BM125285, BQ554641
    Consensus CDS
    CCDS27152.1
    UniProtKB/Swiss-Prot
    B2RRM1, Q64448
    UniProtKB/TrEMBL
    A0A654ICY8
    Conserved Domains (1) summary
    pfam00029
    Location:3 → 233
    Connexin

  2. NM_016975.3 → NP_058671.2  gap junction alpha-3 protein

    See identical proteins and their annotated locations for NP_058671.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK136383, BC138492, BM125285
    Consensus CDS
    CCDS27152.1
    UniProtKB/Swiss-Prot
    B2RRM1, Q64448
    UniProtKB/TrEMBL
    A0A654ICY8
    Related
    ENSMUSP00000059587.7, ENSMUST00000061614.8
    Conserved Domains (1) summary
    pfam00029
    Location:3 → 233
    Connexin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    57271917..57295487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011244959.1 → XP_011243261.1  gap junction alpha-3 protein isoform X1

    See identical proteins and their annotated locations for XP_011243261.1

    UniProtKB/Swiss-Prot
    B2RRM1, Q64448
    UniProtKB/TrEMBL
    A0A654ICY8
    Conserved Domains (1) summary
    pfam00029
    Location:3 → 233
    Connexin
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q64448.4 GenPept UniProtKB/Swiss-Prot:Q64448

Gene LinkOut

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