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Gpha2 glycoprotein hormone alpha 2 [ Mus musculus (house mouse) ]

Gene ID: 170458, updated on 28-Oct-2024

Summary

Official Symbol
Gpha2provided by MGI
Official Full Name
glycoprotein hormone alpha 2provided by MGI
Primary source
MGI:MGI:2156541
See related
Ensembl:ENSMUSG00000024784 AllianceGenome:MGI:2156541
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GPA2; zsig51
Summary
Predicted to enable protein heterodimerization activity and thyrotropin-releasing hormone receptor binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in Rathke's pouch; adenohypophysis pars anterior; adenohypophysis pars intermedia; and neurohypophysis. Orthologous to human GPHA2 (glycoprotein hormone subunit alpha 2). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Biased expression in adrenal adult (RPKM 89.2) and ovary adult (RPKM 21.7) See more
Orthologs
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Genomic context

See Gpha2 in Genome Data Viewer
Location:
19 A; 19 4.35 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (6276431..6277798)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (6226401..6227768)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene basic leucine zipper transcription factor, ATF-like 2 Neighboring gene membrane anchored junction protein Neighboring gene protein phosphatase 2, regulatory subunit B', beta Neighboring gene STARR-positive B cell enhancer ABC_E9990 Neighboring gene STARR-positive B cell enhancer ABC_E5681 Neighboring gene STARR-positive B cell enhancer ABC_E619 Neighboring gene autophagy related 2A Neighboring gene microRNA 194-2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Pathways from PubChem

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables thyrotropin-releasing hormone receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables thyrotropin-releasing hormone receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables thyrotropin-releasing hormone receptor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
glycoprotein hormone alpha-2
Names
putative secreted protein Zsig51
thyrostimulin subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_130453.3NP_569720.1  glycoprotein hormone alpha-2 precursor

    See identical proteins and their annotated locations for NP_569720.1

    Status: VALIDATED

    Source sequence(s)
    BC062804
    Consensus CDS
    CCDS29498.1
    UniProtKB/Swiss-Prot
    Q925Q5
    UniProtKB/TrEMBL
    A2RSW3
    Related
    ENSMUSP00000025698.8, ENSMUST00000025698.14

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    6276431..6277798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)