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COCSUDRAFT_11190 SCO1-SenC-domain-containing protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17045861, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_11190
Gene description
SCO1-SenC-domain-containing protein
Locus tag
COCSUDRAFT_11190
Gene type
protein coding
RNA name
SCO1-SenC-domain-containing protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
3

NW_005178042.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Gly Neighboring gene nucleic acid binding protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178042.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial cytochrome c oxidase assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
SCO1-SenC-domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178042.1 Reference assembly

    Range
    1329532..1330383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005651759.1 → XP_005651816.1  SCO1-SenC-domain-containing protein [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005651816.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0Z9F3
    Conserved Domains (1) summary
    cd02968
    Location:34 → 174
    SCO; SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c ...
Nucleotide Protein
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