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TXNP2 thioredoxin pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 171416, updated on 17-Sep-2024

Summary

Official Symbol
TXNP2provided by HGNC
Official Full Name
thioredoxin pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:49482
See related
AllianceGenome:HGNC:49482
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TXNP2 in Genome Data Viewer
Location:
1p31.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (68513844..68514743, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (68391240..68392139, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (68979527..68980426, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904198 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:68924860-68926059 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:68930526-68931161 Neighboring gene retinoid isomerohydrolase RPE65 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1184 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1185 Neighboring gene DEPDC1 antisense RNA 1 Neighboring gene DEP domain containing 1 Neighboring gene uncharacterized LOC107984967 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:69204935-69205498 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:69205499-69206062 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:69273286-69273387 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:69347197-69347832 Neighboring gene uncharacterized LOC105378783

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_001321.1 

    Range
    101..1000
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    68513844..68514743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    68391240..68392139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)