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Sgk2 serum/glucocorticoid regulated kinase 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 171497, updated on 2-Nov-2024

Summary

Official Symbol
Sgk2provided by RGD
Official Full Name
serum/glucocorticoid regulated kinase 2provided by RGD
Primary source
RGD:620232
See related
EnsemblRapid:ENSRNOG00000033573 AllianceGenome:RGD:620232
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to be located in nucleoplasm. Orthologous to human SGK2 (serum/glucocorticoid regulated kinase 2). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Kidney (RPKM 199.8) and Liver (RPKM 84.1) See more
Orthologs
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Genomic context

See Sgk2 in Genome Data Viewer
Location:
3q42
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (172063625..172089000)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (151644102..151669480)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (159361313..159385843)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene serine and arginine rich splicing factor 6 Neighboring gene L3MBTL histone methyl-lysine binding protein 1 Neighboring gene uncharacterized LOC120101778 Neighboring gene intraflagellar transport 52 Neighboring gene 5S ribosomal RNA Neighboring gene MYB proto-oncogene like 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AS1 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables potassium channel regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables potassium channel regulator activity ISO
Inferred from Sequence Orthology
more info
 
enables potassium channel regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein serine kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase Sgk2
Names
SGK2, serine/threonine kinase 2
NP_604458.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134463.1NP_604458.1  serine/threonine-protein kinase Sgk2

    See identical proteins and their annotated locations for NP_604458.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474005
    UniProtKB/Swiss-Prot
    Q8R4U9
    UniProtKB/TrEMBL
    A0A8I6A9X9, A6JX11
    Related
    ENSRNOP00000081213.1, ENSRNOT00000108319.2
    Conserved Domains (2) summary
    smart00220
    Location:35292
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:39359
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    172063625..172089000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)