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Y73E7A.1 Coiled-coil domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171725, updated on 2-Nov-2024

Summary

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Official Symbol
Y73E7A.1
Official Full Name
Coiled-coil domain-containing protein
Primary source
WormBase:WBGene00022268
Locus tag
CELE_Y73E7A.1
See related
AllianceGenome:WB:WBGene00022268
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable transcription coactivator activity. Predicted to be involved in transcription by RNA polymerase II. Predicted to be located in midbody. Predicted to be active in nucleus. Orthologous to human CCDC124 (coiled-coil domain containing 124). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y73E7A.1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (1629003..1633498)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Bladder cancer-associated protein Neighboring gene WD and tetratricopeptide repeats protein 1;WD_REPEATS_REGION domain-containing protein Neighboring gene Beta-1,4-N-acetylgalactosaminyltransferase bre-4 Neighboring gene Mucin-5AC Neighboring gene Semaphorin-2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in midbody IEA
Inferred from Electronic Annotation
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Coiled-coil domain-containing protein
NP_001040712.1
  • Confirmed by transcript evidence
NP_001040713.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    1629003..1633498
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047247.4 → NP_001040712.1  Coiled-coil domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040712.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9GUM1
    Conserved Domains (1) summary
    pfam06244
    Location:96 → 215
    DUF1014; Protein of unknown function (DUF1014)

  2. NM_001047248.4 → NP_001040713.1  Coiled-coil domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040713.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2AAB8
    Conserved Domains (1) summary
    pfam06244
    Location:19 → 138
    DUF1014; Protein of unknown function (DUF1014)
Nucleotide Protein
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