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phb-1 Mitochondrial prohibitin complex protein 1 [ Caenorhabditis elegans ]

Gene ID: 171768, updated on 2-Nov-2024

Summary

Official Symbol
phb-1
Official Full Name
Mitochondrial prohibitin complex protein 1
Primary source
WormBase:WBGene00004014
Locus tag
CELE_Y37E3.9
See related
AllianceGenome:WB:WBGene00004014
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in several processes, including defecation; regulation of nematode pharyngeal pumping; and regulation of oxidative phosphorylation. Located in mitochondrial membrane. Part of mitochondrial prohibitin complex. Is expressed in several structures, including body wall musculature; excretory canal; hypodermis; intestine; and pharynx. Human ortholog(s) of this gene implicated in breast cancer and sporadic breast cancer. Orthologous to human PHB1 (prohibitin 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See phb-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (2071352..2072547)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Large ribosomal subunit protein uL15 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 2 subunit 1 Neighboring gene IstB_IS21 domain-containing protein;Secreted protein;ethanolamine-phosphate cytidylyltransferase Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of mitochondrial prohibitin complex IPI
Inferred from Physical Interaction
more info
PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Mitochondrial prohibitin complex protein 1
NP_490929.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    2071352..2072547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058528.7NP_490929.1  Mitochondrial prohibitin complex protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_490929.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9BKU4
    Conserved Domains (2) summary
    smart00244
    Location:29190
    PHB; prohibitin homologues
    cd03401
    Location:30220
    SPFH_prohibitin; Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily