etfb-1 Electron transfer flavoprotein subunit beta [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: etfb-1
Official Full Name: Electron transfer flavoprotein subunit beta
Primary source: WormBase:WBGene00017734
Locus tag: CELE_F23C8.5
See related: AllianceGenome:WB:WBGene00017734
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable electron transfer activity. Predicted to be involved in electron transport chain. Predicted to be located in mitochondrial matrix. Human ortholog(s) of this gene implicated in multiple acyl-CoA dehydrogenase deficiency. Orthologous to human ETFB (electron transfer flavoprotein subunit beta). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See etfb-1 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 3

Sequence:: Chromosome: I; NC_003279.8 (2418461..2420353, complement)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F23C8.5 (e-PCR)
- UniSTS:318849

F23C8.6 (e-PCR)
- UniSTS:317368

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables electron transfer activity	IBA Inferred from Biological aspect of Ancestor more info
enables electron transfer activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in mitochondrial matrix	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Electron transfer flavoprotein subunit beta

NP_001293313.1

Confirmed by transcript evidence

NP_490973.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

2418461..2420353 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_058572.9 → NP_490973.2 Electron transfer flavoprotein subunit beta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_490973.2

Status: REVIEWED

UniProtKB/TrEMBL

Q9TXI4

Conserved Domains (1) summary

COG2086
Location:1 → 254

FixA; Electron transfer flavoprotein, alpha and beta subunits [Energy production and conversion]
NM_001306384.3 → NP_001293313.1 Electron transfer flavoprotein subunit beta [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001293313.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A061AJJ5

Conserved Domains (1) summary

cl00292
Location:1 → 58

AANH_like; Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.