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Y47G6A.7 Sugar phosphate transporter domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171918, updated on 2-Nov-2024

Summary

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Official Symbol
Y47G6A.7
Official Full Name
Sugar phosphate transporter domain-containing protein
Primary source
WormBase:WBGene00021637
Locus tag
CELE_Y47G6A.7
See related
AllianceGenome:WB:WBGene00021637
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable antiporter activity. Predicted to be involved in UDP-glucose transmembrane transport. Predicted to be located in membrane. Predicted to be active in cis-Golgi network and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in several structures, including anal depressor muscle; excretory cell; intestine; nervous system; and reproductive system. Orthologous to human SLC35C2 (solute carrier family 35 member C2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Y47G6A.7 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003279.8 (3502736..3508421)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Flap endonuclease 1 Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Golgi phosphoprotein 3 homolog sauron Neighboring gene Histone acetyltransferase GCN5 Neighboring gene Peptidase M14 carboxypeptidase A domain-containing protein;ShKT domain-containing protein Neighboring gene 40S ribosomal protein S19-binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables antiporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in UDP-glucose transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Sugar phosphate transporter domain-containing protein
NP_001021769.1
  • Confirmed by transcript evidence
NP_001021770.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    3502736..3508421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026599.5 → NP_001021770.1  Sugar phosphate transporter domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021770.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q6AW10
    Conserved Domains (1) summary
    COG0697
    Location:76 → 379
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]

  2. NM_001026598.8 → NP_001021769.1  Sugar phosphate transporter domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021769.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N3S9
    Conserved Domains (1) summary
    COG0697
    Location:76 → 379
    RhaT; Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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