F53F10.2 Antizyme inhibitor 1;BRCA1;Uncharacterized protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: F53F10.2
Official Full Name: Antizyme inhibitor 1;BRCA1;Uncharacterized protein
Primary source: WormBase:WBGene00018764
Locus tag: CELE_F53F10.2
See related: AllianceGenome:WB:WBGene00018764
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable catalytic activity. Predicted to be involved in polyamine biosynthetic process. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F53F10.2 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 7

Sequence:: Chromosome: I; NC_003279.8 (3830562..3834124)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F53F10.2 (e-PCR)
- UniSTS:311748

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables catalytic activity	IEA Inferred from Electronic Annotation more info
NOT enables ornithine decarboxylase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in polyamine biosynthetic process	IEA Inferred from Electronic Annotation more info
NOT involved_in putrescine biosynthetic process from ornithine	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
NOT is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Antizyme inhibitor 1;BRCA1;Uncharacterized protein

NP_001368678.1

Confirmed by transcript evidence

NP_001368679.1

Confirmed by transcript evidence

NP_001379758.1

Confirmed by transcript evidence

NP_001380232.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

3830562..3834124

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001393290.1 → NP_001379758.1 Antizyme inhibitor 1 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

O01579

Conserved Domains (1) summary

cl00261
Location:55 → 416

PLPDE_III; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes
NM_001393288.1 → NP_001380232.1 Uncharacterized protein CELE_F53F10.2 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATM2
NM_001381737.3 → NP_001368678.1 Uncharacterized protein CELE_F53F10.2 [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATM9
NM_001381744.1 → NP_001368679.1 BRCA1, partial [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2K5ATP6