tufm-2 Tr-type G domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: tufm-2
Official Full Name: Tr-type G domain-containing protein
Primary source: WormBase:WBGene00007001
Locus tag: CELE_C43E11.4
See related: AllianceGenome:WB:WBGene00007001
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable translation elongation factor activity. Predicted to be involved in mitochondrial translational elongation. Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tufm-2 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 3

Sequence:: Chromosome: I; NC_003279.8 (4247753..4249415)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

C43E11.4 (e-PCR)
- UniSTS:308760

C43E11.8 (e-PCR)
- UniSTS:308762

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables translation elongation factor activity	IBA Inferred from Biological aspect of Ancestor more info
enables translation elongation factor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in mitochondrial translational elongation	IBA Inferred from Biological aspect of Ancestor more info
involved_in translation	IEA Inferred from Electronic Annotation more info
involved_in translational elongation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Tr-type G domain-containing protein

NP_491338.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

4247753..4249415

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_058937.6 → NP_491338.2 Tr-type G domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_491338.2

Status: REVIEWED

UniProtKB/TrEMBL

G5EDF5

Conserved Domains (1) summary

PRK12736
Location:43 → 423

PRK12736; elongation factor Tu; Reviewed