U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pqn-52 DUF1080 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172210, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
pqn-52
Official Full Name
DUF1080 domain-containing protein
Primary source
WormBase:WBGene00019713
Locus tag
CELE_M01E11.4
See related
AllianceGenome:WB:WBGene00019713
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See pqn-52 in Genome Data Viewer
Location:
chromosome: I
Exon count:
11
Sequence:
Chromosome: I; NC_003279.8 (5566343..5570085, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Lethal giant larvae homologue 2 domain-containing protein;V-SNARE coiled-coil homology domain-containing protein Neighboring gene ncRNA Neighboring gene K Homology domain-containing protein Neighboring gene CSD domain-containing protein Neighboring gene RecQ-mediated genome instability protein 1 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. DEPS-1 is required for piRNA-dependent silencing and PIWI condensate organisation in Caenorhabditis elegans. Suen KM, et al. Nat Commun, 2020 Aug 25. PMID 32843637, Free PMC Article
  2. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  3. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
DUF1080 domain-containing protein
NP_001021575.1
  • Confirmed by transcript evidence
NP_491629.1
  • Confirmed by transcript evidence
NP_491630.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    5566343..5570085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026404.8 → NP_001021575.1  DUF1080 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021575.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G4SL51

  2. NM_059229.7 → NP_491630.1  DUF1080 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491630.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L044

  3. NM_059228.7 → NP_491629.1  DUF1080 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491629.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EER0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools