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B0207.6 GPN-loop GTPase 2 [ Caenorhabditis elegans ]

Gene ID: 172267, updated on 2-Nov-2024

Summary

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Official Symbol
B0207.6
Official Full Name
GPN-loop GTPase 2
Primary source
WormBase:WBGene00015029
Locus tag
CELE_B0207.6
See related
AllianceGenome:WB:WBGene00015029
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable GTPase activity. Orthologous to human GPN2 (GPN-loop GTPase 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See B0207.6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (5935370..5936957, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene SUEL-type lectin domain-containing protein Neighboring gene Aurora/IPL1-related protein kinase 2 Neighboring gene Guanine nucleotide-binding protein alpha-14 subunit Neighboring gene Protein kinase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
GPN-loop GTPase 2
NP_491713.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    5935370..5936957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059312.3 → NP_491713.2  GPN-loop GTPase 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491713.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01426
    Conserved Domains (2) summary
    COG1100
    Location:4 → 174
    Gem1; GTPase SAR1 family domain [General function prediction only]
    pfam03029
    Location:6 → 251
    ATP_bind_1; Conserved hypothetical ATP binding protein
Nucleotide Protein
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