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tres-1 Treslin STD domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172287, updated on 2-Nov-2024

Summary

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Official Symbol
tres-1
Official Full Name
Treslin STD domain-containing protein
Primary source
WormBase:WBGene00022750
Locus tag
CELE_ZK484.4
See related
AllianceGenome:WB:WBGene00022750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in several structures, including AB; ABa; EMS; Psub1; and Psub2. Orthologous to human TICRR (TOPBP1 interacting checkpoint and replication regulator). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tres-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
15
Sequence:
Chromosome: I; NC_003279.8 (6070232..6078896, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene GPI ethanolamine phosphate transferase 3 Neighboring gene Methyl-CpG binding protein 2/3 C-terminal domain-containing protein Neighboring gene Histone H1 Neighboring gene ncRNA Neighboring gene ABC-type antigen peptide transporter Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DNSN-1 recruits GINS for CMG helicase assembly during DNA replication initiation in Caenorhabditis elegans. Xia Y, et al. Science, 2023 Sep 22. PMID 37590372, Free PMC Article
  2. Dose-dependent functions of SWI/SNF BAF in permitting and inhibiting cell proliferation in vivo. van der Vaart A, et al. Sci Adv, 2020 May. PMID 32494730, Free PMC Article
  3. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  4. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Treslin STD domain-containing protein
NP_491753.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    6070232..6078896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059352.4 → NP_491753.1  Treslin STD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491753.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ16
    Conserved Domains (1) summary
    pfam15292
    Location:224 → 432
    Treslin_N; Treslin N-terminus
Nucleotide Protein
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