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tres-1 Treslin STD domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172287, updated on 18-Sep-2024

Summary

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Official Symbol
tres-1
Official Full Name
Treslin STD domain-containing protein
Primary source
WormBase:WBGene00022750
Locus tag
CELE_ZK484.4
See related
AllianceGenome:WB:WBGene00022750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in DNA replication; mitotic DNA replication checkpoint signaling; and response to ionizing radiation. Predicted to be located in nucleus. Is expressed in several structures, including AB; ABa; EMS; Psub1; and Psub2. Orthologous to human TICRR (TOPBP1 interacting checkpoint and replication regulator). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See tres-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
15
Sequence:
Chromosome: I; NC_003279.8 (6070232..6078896, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene GPI ethanolamine phosphate transferase 3 Neighboring gene Methyl-CpG binding protein 2/3 C-terminal domain-containing protein Neighboring gene Histone H1 Neighboring gene ncRNA Neighboring gene ABC-type antigen peptide transporter Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Treslin STD domain-containing protein
NP_491753.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    6070232..6078896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059352.4 → NP_491753.1  Treslin STD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491753.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZ16
    Conserved Domains (1) summary
    pfam15292
    Location:224 → 432
    Treslin_N; Treslin N-terminus
Nucleotide Protein
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