golg-5 Golgin-84 [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: golg-5
Official Full Name: Golgin-84
Primary source: WormBase:WBGene00011975
Locus tag: CELE_T24B1.1
See related: AllianceGenome:WB:WBGene00011975
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable protein homodimerization activity. Predicted to be involved in Golgi organization and retrograde transport, vesicle recycling within Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cisterna and Golgi membrane. Orthologous to human GOLGA5 (golgin A5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See golg-5 in Genome Data Viewer

Location:: chromosome: I

Exon count:: 8

Sequence:: Chromosome: I; NC_003279.8 (7676668..7679046)

Chromosome I - NC_003279.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F26A3.7 (e-PCR)
- UniSTS:307542

T23G11.8 (e-PCR)
- UniSTS:308092

STS1-117 (e-PCR)
- UniSTS:241602

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables protein homodimerization activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in Golgi organization	IBA Inferred from Biological aspect of Ancestor more info
involved_in Golgi organization	IEA Inferred from Electronic Annotation more info
involved_in Golgi organization	ISS Inferred from Sequence or Structural Similarity more info
involved_in Golgi vesicle transport	ISS Inferred from Sequence or Structural Similarity more info
involved_in retrograde transport, vesicle recycling within Golgi	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
located_in Golgi apparatus	ISS Inferred from Sequence or Structural Similarity more info
is_active_in Golgi cisterna	IBA Inferred from Biological aspect of Ancestor more info
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Golgin-84

NP_492137.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003279.8 Reference assembly

Range

7676668..7679046

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_059736.6 → NP_492137.1 Golgin-84 [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_492137.1

Status: REVIEWED

UniProtKB/Swiss-Prot

P90970, P91831

Conserved Domains (3) summary

pfam09787
Location:89 → 538

Golgin_A5; Golgin subfamily A member 5

cd16269
Location:398 → 409

GBP_C; coiled coil [structural motif]

cl20817
Location:267 → 424

GBP_C; Guanylate-binding protein, C-terminal domain