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spe-12 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 172606, updated on 2-Nov-2024

Summary

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Official Symbol
spe-12
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00004966
Locus tag
CELE_T02E1.1
See related
AllianceGenome:WB:WBGene00004966
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in spermatid development. Located in plasma membrane. Is expressed in spermatid and in male. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See spe-12 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (8224539..8226297, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein dhs-3 Neighboring gene C3H1-type domain-containing protein Neighboring gene Fungal_trans domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene FERM domain-containing protein Neighboring gene Ovule protein;Secreted protein Neighboring gene Nematode Specific Peptide family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. spe-12 encodes a sperm cell surface protein that promotes spermiogenesis in Caenorhabditis elegans. Nance J, et al. Genetics, 1999 May. PMID 10224255, Free PMC Article
  2. Initiation of spermiogenesis in C. elegans: a pharmacological and genetic analysis. Shakes DC, et al. Dev Biol, 1989 Jul. PMID 2731646
  3. Dynamic localization of SPE-9 in sperm: a protein required for sperm-oocyte interactions in Caenorhabditis elegans. Zannoni S, et al. BMC Dev Biol, 2003 Dec 3. PMID 14653860, Free PMC Article
  4. Sperm motility and MSP. Smith H. WormBook, 2006 Feb 1. PMID 18050481, Free PMC Article
  5. Regulation of sperm activation by SWM-1 is required for reproductive success of C. elegans males. Stanfield GM, et al. Curr Biol, 2006 Feb 7. PMID 16461278

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in spermatid development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Uncharacterized protein
NP_492242.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8224539..8226297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059841.2 → NP_492242.1  Uncharacterized protein CELE_T02E1.1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492242.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEF3
Nucleotide Protein
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