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F43G9.13 Vesicle transport protein [ Caenorhabditis elegans ]

Gene ID: 172654, updated on 18-Sep-2024

Summary

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Official Symbol
F43G9.13
Official Full Name
Vesicle transport protein
Primary source
WormBase:WBGene00009673
Locus tag
CELE_F43G9.13
See related
AllianceGenome:WB:WBGene00009673
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM170A (transmembrane protein 170A) and TMEM170B (transmembrane protein 170B). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See F43G9.13 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (8605263..8606574)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein Neighboring gene DFDF domain-containing protein Neighboring gene putative isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial Neighboring gene ncRNA Neighboring gene LysM domain-containing protein Neighboring gene PWWP domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Vesicle transport protein
NP_492329.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8605263..8606574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059928.6 → NP_492329.1  Vesicle transport protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492329.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95QG3
    Conserved Domains (1) summary
    pfam10190
    Location:41 → 139
    Tmemb_170; Putative transmembrane protein 170
Nucleotide Protein
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