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cylc-2 Lipoprotein [ Caenorhabditis elegans ]

Gene ID: 172787, updated on 2-Nov-2024

Summary

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Official Symbol
cylc-2
Official Full Name
Lipoprotein
Primary source
WormBase:WBGene00008063
Locus tag
CELE_C41G7.6
See related
AllianceGenome:WB:WBGene00008063
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in nervous system; sperm; and in male. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cylc-2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (9526539..9527441, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene SET domain-containing protein Neighboring gene Aryl hydrocarbon receptor protein 1 Neighboring gene ncRNA Neighboring gene DUF3278 domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Saposin B-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C. elegans CYLC-2 localizes to sperm. Krauchunas AR, et al. MicroPubl Biol, 2020 Sep 29. PMID 33029584, Free PMC Article
  2. CRISPR/Cas9 Mediated Fluorescent Tagging of Caenorhabditis elegans SPE-38 Reveals a Complete Localization Pattern in Live Spermatozoa. Zuo Y, et al. Biomolecules, 2023 Mar 30. PMID 37189371, Free PMC Article
  3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

General protein information

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Preferred Names
Lipoprotein
NP_492531.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    9526539..9527441 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060130.5 → NP_492531.1  Lipoprotein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492531.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93370
Nucleotide Protein
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Gene LinkOut

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