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mom-5 Protein mom-5 [ Caenorhabditis elegans ]

Gene ID: 172856, updated on 2-Nov-2024

Summary

Official Symbol
mom-5
Official Full Name
Protein mom-5
Primary source
WormBase:WBGene00003397
Locus tag
CELE_T23D8.1
See related
AllianceGenome:WB:WBGene00003397
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable Wnt receptor activity and Wnt-protein binding activity. Involved in several processes, including neuron migration; positive regulation of cell migration; and positive regulation of cellular component organization. Predicted to be located in early endosome and membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including anus; gonad; hypodermis; nervous system; and pharynx. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome; nonsyndromic congenital nail disorder 1; omodysplasia 2; and schizophrenia. Orthologous to several human genes including FZD1 (frizzled class receptor 1); FZD2 (frizzled class receptor 2); and FZD7 (frizzled class receptor 7). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See mom-5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003279.8 (9965574..9970037)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase Neighboring gene ncRNA Neighboring gene Tetraspanin Neighboring gene Protein LTV1 homolog Neighboring gene Eukaryotic translation initiation factor 3 subunit C

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables Wnt receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables Wnt receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables Wnt-protein binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in Wnt signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in Wnt signaling pathway, regulating spindle positioning IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in embryo development ending in birth or egg hatching IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryonic digestive tract morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in embryonic morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in endodermal cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in endodermal cell fate specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in engulfment of apoptotic cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in establishment of mitotic spindle orientation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in establishment of mitotic spindle orientation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in gastrulation IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in gastrulation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in interneuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in left/right axis specification IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in left/right axis specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuroblast migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuroblast migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in non-canonical Wnt signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of anterior/posterior axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of distal tip cell migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of distal tip cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of engulfment of apoptotic cell IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of engulfment of apoptotic cell IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of engulfment of apoptotic cell IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of sensory neuron axon guidance IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in sensory neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
Protein mom-5
NP_001300437.1
  • Confirmed by transcript evidence
NP_492635.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    9965574..9970037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060234.7NP_492635.1  Protein mom-5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492635.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A0K3AWM6
    Conserved Domains (2) summary
    cd07458
    Location:35147
    CRD_FZ1_like; Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1
    pfam01534
    Location:218548
    Frizzled; Frizzled/Smoothened family membrane region
  2. NM_001313508.3NP_001300437.1  Protein mom-5 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0A0K3AWM6, G5EEF7
    Conserved Domains (2) summary
    cd07458
    Location:35147
    CRD_FZ1_like; Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1
    cd13951
    Location:219550
    7tmF_Frizzled_SMO; class F frizzled/smoothened family, member of the 7-transmembrane G protein-coupled receptor superfamily