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T20F10.2 CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3 [ Caenorhabditis elegans ]

Gene ID: 172897, updated on 2-Nov-2024

Summary

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Official Symbol
T20F10.2
Official Full Name
CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3
Primary source
WormBase:WBGene00011864
Locus tag
CELE_T20F10.2
See related
AllianceGenome:WB:WBGene00011864
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See T20F10.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (10298140..10300598)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene 63 kDa sperm flagellar membrane protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serine/threonine-protein kinase WARTS homolog Neighboring gene SEC7 domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3
NP_001040684.1
  • Confirmed by transcript evidence
NP_001040686.1
  • Confirmed by transcript evidence
NP_001367140.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    10298140..10300598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047219.4 → NP_001040684.1  Si:ch211-1a19.3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040684.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O18092
    Conserved Domains (1) summary
    TIGR02168
    Location:50 → 259
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. NM_001381192.1 → NP_001367140.1  Leucine zipper protein 1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q1ZXS4
    Conserved Domains (1) summary
    COG1196
    Location:50 → 241
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  3. NM_001047221.3 → NP_001040686.1  CAP-Gly domain-containing linker protein 1-like [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040686.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q1ZXS3
Nucleotide Protein
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