U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Mesp1 mesoderm posterior 1 [ Mus musculus (house mouse) ]

Gene ID: 17292, updated on 2-Nov-2024

Summary

Official Symbol
Mesp1provided by MGI
Official Full Name
mesoderm posterior 1provided by MGI
Primary source
MGI:MGI:107785
See related
Ensembl:ENSMUSG00000030544 AllianceGenome:MGI:107785
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
bHLHc5
Summary
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including heart development; negative regulation of cell fate specification; and regulation of DNA-templated transcription. Acts upstream of or within several processes, including cardioblast migration; mesodermal cell migration; and signal transduction involved in regulation of gene expression. Located in nucleus. Is expressed in several structures, including allantois; central nervous system; embryo mesenchyme; primitive streak; and sensory organ. Human ortholog(s) of this gene implicated in myocardial infarction. Orthologous to human MESP1 (mesoderm posterior bHLH transcription factor 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in testis adult (RPKM 56.3) and lung adult (RPKM 11.0) See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Mesp1 in Genome Data Viewer
Location:
7 D2; 7 45.16 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (79441989..79443338, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (79792241..79793590, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene WD repeat domain 93 Neighboring gene predicted gene 44705 Neighboring gene mesoderm posterior 2 Neighboring gene alanyl aminopeptidase, membrane

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Clone Names

  • MGC159208, MGC159210

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac atrium formation IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac atrium formation ISO
Inferred from Sequence Orthology
more info
 
involved_in cardiac cell fate determination IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cardiac muscle cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in cardiac vascular smooth muscle cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac vascular smooth muscle cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in cardiac ventricle formation IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac ventricle formation ISO
Inferred from Sequence Orthology
more info
 
involved_in cardioblast anterior-lateral migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cardioblast migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cardioblast migration to the midline involved in heart field formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryonic heart tube morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in endothelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in endothelial cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in gastrulation IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in growth involved in heart morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in heart induction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in heart looping IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in heart morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within heart morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in lateral mesoderm development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mesoderm formation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within mesodermal cell migration IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in negative regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of endodermal cell fate specification IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of mesodermal cell fate specification IDA
Inferred from Direct Assay
more info
PubMed 
involved_in neurogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in neurogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of Notch signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of hepatocyte differentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of striated muscle cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in secondary heart field specification IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within signal transduction involved in regulation of gene expression IDA
Inferred from Direct Assay
more info
PubMed 
involved_in sinoatrial node cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in sinoatrial node cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in sinus venosus morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in somite rostral/caudal axis specification IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in nucleoplasm TAS
Traceable Author Statement
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
mesoderm posterior protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008588.2NP_032614.2  mesoderm posterior protein 1

    See identical proteins and their annotated locations for NP_032614.2

    Status: VALIDATED

    Source sequence(s)
    BC125505, CF105615
    Consensus CDS
    CCDS21387.1
    UniProtKB/Swiss-Prot
    P97309, Q059W2
    Related
    ENSMUSP00000032760.6, ENSMUST00000032760.6
    Conserved Domains (1) summary
    pfam00010
    Location:77130
    HLH; Helix-loop-helix DNA-binding domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    79441989..79443338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)