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tag-296 Glycolipid transfer protein domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172997, updated on 2-Nov-2024

Summary

Official Symbol
tag-296
Official Full Name
Glycolipid transfer protein domain-containing protein
Primary source
WormBase:WBGene00018632
Locus tag
CELE_F49D11.9
See related
AllianceGenome:WB:WBGene00018632
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ceramide 1-phosphate binding activity and ceramide 1-phosphate transfer activity. Predicted to be involved in ceramide transport and intermembrane lipid transfer. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to several human genes including CPTP (ceramide-1-phosphate transfer protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See tag-296 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (10933810..10935559, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene ncRNA Neighboring gene tRNA-Gly Neighboring gene ncRNA Neighboring gene tRNA-Gly Neighboring gene Transmembrane protein Neighboring gene WD_REPEATS_REGION domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ceramide 1-phosphate transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables lipid transfer activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ceramide 1-phosphate transport IEA
Inferred from Electronic Annotation
more info
 
involved_in ceramide transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intermembrane lipid transfer IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Glycolipid transfer protein domain-containing protein
NP_001355496.1
  • Confirmed by transcript evidence
NP_001380241.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    10933810..10935559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001392942.1NP_001380241.1  Glycolipid transfer protein domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3P6NP42
    Conserved Domains (1) summary
    pfam08718
    Location:49181
    GLTP; Glycolipid transfer protein (GLTP)
  2. NM_001368568.3NP_001355496.1  Glycolipid transfer protein domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A3P6P940
    Conserved Domains (1) summary
    pfam08718
    Location:49184
    GLTP; Glycolipid transfer protein (GLTP)