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pes-2.2 F-box domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173026, updated on 17-Oct-2024

Summary

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Official Symbol
pes-2.2
Official Full Name
F-box domain-containing protein
Primary source
WormBase:WBGene00010158
Locus tag
CELE_F56G4.3
See related
AllianceGenome:WB:WBGene00010158
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See pes-2.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (11358078..11359305, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Acyl_transf_3 domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene F-box associated domain-containing protein Neighboring gene Rod_C domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
  2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
F-box domain-containing protein
NP_492910.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    11358078..11359305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060509.5 → NP_492910.1  F-box domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492910.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECQ5
    Conserved Domains (1) summary
    pfam07735
    Location:217 → 277
    FBA_2; F-box associated
Nucleotide Protein
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