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R05D7.3 Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 173095, updated on 18-Sep-2024

Summary

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Official Symbol
R05D7.3
Official Full Name
Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein
Primary source
WormBase:WBGene00011028
Locus tag
CELE_R05D7.3
See related
AllianceGenome:WB:WBGene00011028
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including TMEM200A (transmembrane protein 200A). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See R05D7.3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (12168175..12177782, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF3278 domain-containing protein Neighboring gene SPK domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene sn-1-specific diacylglycerol lipase ABHD11 Neighboring gene Nematode Specific Peptide family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transmembrane protein;Transmembrane protein 200C;Uncharacterized protein
NP_001263528.1
  • Confirmed by transcript evidence
NP_001263529.1
  • Confirmed by transcript evidence
NP_001263530.1
  • Confirmed by transcript evidence
NP_001364813.1
  • Confirmed by transcript evidence
NP_001368152.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    12168175..12177782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001377658.2 → NP_001364813.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7RNM1
    Conserved Domains (1) summary
    pfam10177
    Location:1 → 70
    DUF2371; Uncharacterized conserved protein (DUF2371)

  2. NM_001381226.1 → NP_001368152.1  Transmembrane protein 200C [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7S160
    Conserved Domains (1) summary
    pfam10177
    Location:63 → 145
    DUF2371; Uncharacterized conserved protein (DUF2371)

  3. NM_001276599.3 → NP_001263528.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263528.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7SF94
    Conserved Domains (1) summary
    pfam10177
    Location:29 → 111
    DUF2371; Uncharacterized conserved protein (DUF2371)

  4. NM_001276600.3 → NP_001263529.1  Transmembrane protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263529.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7SA63
    Conserved Domains (1) summary
    pfam10177
    Location:21 → 103
    DUF2371; Uncharacterized conserved protein (DUF2371)

  5. NM_001276601.3 → NP_001263530.1  Uncharacterized protein CELE_R05D7.3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263530.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    J7SEZ9
    Conserved Domains (1) summary
    pfam10177
    Location:12 → 94
    DUF2371; Uncharacterized conserved protein (DUF2371)
Nucleotide Protein
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