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tads-1 Replication termination factor 2 [ Caenorhabditis elegans ]

Gene ID: 173206, updated on 2-Nov-2024

Summary

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Official Symbol
tads-1
Official Full Name
Replication termination factor 2
Primary source
WormBase:WBGene00007217
Locus tag
CELE_C01A2.5
See related
AllianceGenome:WB:WBGene00007217
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in mitotic DNA replication termination. Predicted to be active in nucleus. Orthologous to human RTF2 (replication termination factor 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See tads-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (13384752..13387084)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene WWE domain-containing protein Neighboring gene Membrane insertase YidC/Oxa/ALB C-terminal domain-containing protein Neighboring gene Charged multivesicular body protein 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Domain selection combined with improved cloning strategy for high throughput expression of higher eukaryotic proteins. Chen Y, et al. BMC Biotechnol, 2007 Jul 30. PMID 17663785, Free PMC Article
  2. The Regulatory Landscape of Lineage Differentiation in a Metazoan Embryo. Du Z, et al. Dev Cell, 2015 Sep 14. PMID 26321128, Free PMC Article
  3. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  4. Defect-buffering cellular plasticity increases robustness of metazoan embryogenesis. Xiao L, et al. Cell Syst, 2022 Aug 17. PMID 35882226
  5. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in mitotic DNA replication termination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Replication termination factor 2
NP_493355.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    13384752..13387084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060954.8 → NP_493355.1  Replication termination factor 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493355.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O02209
    Conserved Domains (1) summary
    pfam04641
    Location:1 → 285
    Rtf2; Rtf2 RING-finger
Nucleotide Protein
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