U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gpdh-1 Glycerol-3-phosphate dehydrogenase [NAD(+)] [ Caenorhabditis elegans ]

Gene ID: 173272, updated on 2-Nov-2024

Summary

Official Symbol
gpdh-1
Official Full Name
Glycerol-3-phosphate dehydrogenase [NAD(+)]
Primary source
WormBase:WBGene00009824
Locus tag
CELE_F47G4.3
See related
AllianceGenome:WB:WBGene00009824
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable glycerol-3-phosphate dehydrogenase (quinone) activity. Predicted to be involved in NADH oxidation and glycerol-3-phosphate metabolic process. Predicted to be part of glycerol-3-phosphate dehydrogenase (FAD) complex. Predicted to be active in cytosol. Is expressed in hypodermis and intestine. Human ortholog(s) of this gene implicated in Brugada syndrome 2. Orthologous to human GPD1 (glycerol-3-phosphate dehydrogenase 1) and GPD1L (glycerol-3-phosphate dehydrogenase 1 like). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See gpdh-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (14075837..14078211)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Protein zer-1 homolog Neighboring gene F-box domain-containing protein Neighboring gene F-box domain-containing protein

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 
enables glycerol-3-phosphate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 
enables glycerol-3-phosphate dehydrogenase (quinone) activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in NADH oxidation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glycerol-3-phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in glycerol-3-phosphate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Glycerol-3-phosphate dehydrogenase [NAD(+)]
NP_493454.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    14075837..14078211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_061053.8NP_493454.1  Glycerol-3-phosphate dehydrogenase [NAD(+)] [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493454.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XTS4
    Conserved Domains (3) summary
    TIGR03376
    Location:23367
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))
    pfam01210
    Location:23199
    NAD_Gly3P_dh_N; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
    pfam07479
    Location:223356
    NAD_Gly3P_dh_C; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus